EnhancerDB
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  3. rs112009748[chr6:12348545]
Enhancers that have rs112009748[chr6:12348545]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12340945 12361575 enh38802
Astrocyte Colon (HCT116) Pancreas Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs112009748[chr6:12348545]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12348527 12348548 IRF1 JASPAR yes 99964196
chr6 12348530 12348545 FOXP1 JASPAR yes 99964198
chr6 12348532 12348547 FOXP1 JASPAR yes 99964199
chr6 12348533 12348548 FOXP1 JASPAR yes 99964200
chr6 12348535 12348550 FOXP1 JASPAR yes 99964201
chr6 12348539 12348556 BCL6B JASPAR yes 99964202
chr6 12348540 12348550 HOXA13 JASPAR yes 99964203
chr6 12348540 12348550 HOXB13 JASPAR yes 99964204
chr6 12348540 12348550 HOXD13 JASPAR yes 99964205
chr6 12348544 12348562 IRF2 JASPAR yes 99964206
chr6 12348545 12348566 IRF1 JASPAR yes 99964207
Genes associated with rs112009748[chr6:12348545], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More