EnhancerDB
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  3. rs112029148[chr1:203481855]
Enhancers that have rs112029148[chr1:203481855]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203471885 203497995 enh12556
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs112029148[chr1:203481855]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203479781 203481906 ZNF143 GTRD no Epithelial (MCF-7) 21369011
chr1 203479893 203481935 ZNF143 GTRD no Epithelial (MCF-7) 21369012
chr1 203480093 203481879 ZNF274 GTRD no Cervix (HeLa-S3) 21369020
chr1 203481708 203482358 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369079
chr1 203481708 203482358 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107858950
chr1 203481760 203482416 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21369080
chr1 203481760 203482416 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107858951
chr1 203481780 203482290 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369081
chr1 203481780 203482290 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107858952
chr1 203481811 203482387 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107858953
chr1 203481848 203481862 RXRB JASPAR yes 34633888
chr1 203481848 203481862 RXRG JASPAR yes 34633889
chr1 203481855 203482395 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107858954
Genes associated with rs112029148[chr1:203481855], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 204167288 204183220 - GOLT1A ENSG00000174567.7 204183220 685433 Breast 0.385927 1750