EnhancerDB
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  3. rs11206497[chr1:55436790]
Enhancers that have rs11206497[chr1:55436790]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55426360 55441461 enh371
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs11206497[chr1:55436790]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55436779 55436797 NFYA JASPAR yes 29012242
chr1 55436782 55436798 NFYA JASPAR yes 29012243
chr1 55436785 55436800 NFYB JASPAR yes 29012244
chr1 55436787 55436792 NFY TRANSFAC yes 29012245
Genes associated with rs11206497[chr1:55436790], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 54519260 54578192 + TCEANC2 ENSG00000116205.6 54519260 858598 Breast 0.127344 723