EnhancerDB
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  3. rs112068785[chr1:8540188]
Enhancers that have rs112068785[chr1:8540188]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8493665 8545435 enh43
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs112068785[chr1:8540188]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8540176 8540197 IRF1 JASPAR yes 26560474
chr1 8540177 8540198 IRF1 JASPAR yes 26560475
chr1 8540182 8540203 IRF1 JASPAR yes 26560476
chr1 8540183 8540189 TCF4 TRANSFAC yes 26560477
chr1 8540183 8540198 FOXP1 JASPAR yes 26560478
chr1 8540183 8540204 IRF1 JASPAR yes 26560479
chr1 8540184 8540195 FOXP2 JASPAR yes 26560480
chr1 8540184 8540196 FOXC2 JASPAR yes 26560481
chr1 8540184 8540199 STAT2 JASPAR yes 26560482
chr1 8540185 8540200 FOXP1 JASPAR yes 26560483
chr1 8540185 8540206 IRF1 JASPAR yes 26560484
chr1 8540186 8540206 RREB1 JASPAR yes 26560485
chr1 8540186 8540207 IRF1 JASPAR yes 26560486
chr1 8540187 8540202 FOXP1 JASPAR yes 26560487
chr1 8540188 8540203 FOXP1 JASPAR yes 26560488
Genes associated with rs112068785[chr1:8540188], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More