EnhancerDB
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  3. rs112085962[chr17:25805643]
Enhancers that have rs112085962[chr17:25805643]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25791425 25838215 enh17063
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr17 25805507 25805777 vista24263
VISTA
Transcript factors that have rs112085962[chr17:25805643]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25805639 25805654 RUNX2 JASPAR yes 21211845
chr17 25805639 25805654 RUNX2 JASPAR yes 53634645
chr17 25805640 25805644 NFE TRANSFAC yes 21211846
chr17 25805640 25805644 NFE TRANSFAC yes 53634646
Genes associated with rs112085962[chr17:25805643], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More