EnhancerDB
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  3. rs112179222[chr19:13142597]
Enhancers that have rs112179222[chr19:13142597]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13138760 13157647 enh17929
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs112179222[chr19:13142597]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13142055 13144205 TCF7L2 GTRD no Colon (HCT116) 21850182
chr19 13142055 13144205 TCF7L2 GTRD no Colon (HCT116) 108387507
chr19 13142572 13143500 TEF1 GTRD no Bone (Osteoblast) 21850183
chr19 13142572 13143500 TEF1 GTRD no Bone (Osteoblast) 108387508
chr19 13142578 13142597 CTCF JASPAR yes 112502698
chr19 13142590 13142610 ESR1 JASPAR yes 112502699
Genes associated with rs112179222[chr19:13142597], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More