EnhancerDB
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  3. rs112216505[chr6:25180161]
Enhancers that have rs112216505[chr6:25180161]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25163505 25184315 enh23129
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs112216505[chr6:25180161]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25180154 25180164 ID4 JASPAR yes 100832484
chr6 25180154 25180164 TCF3 JASPAR yes 100832485
chr6 25180154 25180164 TCF4 JASPAR yes 100832486
chr6 25180155 25180164 SNAI2 JASPAR yes 100832487
chr6 25180156 25180161 USF2 TRANSFAC yes 100832488
Genes associated with rs112216505[chr6:25180161], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More