EnhancerDB
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  3. rs112222224[chr6:25172539]
Enhancers that have rs112222224[chr6:25172539]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25163505 25184315 enh23129
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs112222224[chr6:25172539]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25172519 25172539 RREB1 JASPAR yes 100831167
chr6 25172527 25172539 FOXI1 JASPAR yes 100831169
chr6 25172527 25172547 RREB1 JASPAR yes 100831170
chr6 25172528 25172542 FOXF2 JASPAR yes 100831171
chr6 25172528 25172543 FOXP1 JASPAR yes 100831172
chr6 25172530 25172542 FOXC2 JASPAR yes 100831173
chr6 25172531 25172542 FOXP2 JASPAR yes 100831174
chr6 25172531 25172543 FOXI1 JASPAR yes 100831175
chr6 25172533 25172541 FOXG1 JASPAR yes 100831176
chr6 25172533 25172541 FOXO3 JASPAR yes 100831177
Genes associated with rs112222224[chr6:25172539], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More