EnhancerDB
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  3. rs112229708[chr1:54767225]
Enhancers that have rs112229708[chr1:54767225]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54761072 54782679 enh11866
Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs112229708[chr1:54767225]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54763077 54767289 ZNF274 GTRD no Bone Marrow (K562) 107804699
chr1 54763077 54767289 ZNF274 GTRD no Bone Marrow (K562) 107804700
chr1 54767215 54767225 NKX2-3 JASPAR yes 28970596
chr1 54767216 54767225 NKX2-8 JASPAR yes 28970597
chr1 54767219 54767230 TBX20 JASPAR yes 28970598
chr1 54767224 54767239 PRDM1 JASPAR yes 28970599
Genes associated with rs112229708[chr1:54767225], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More