EnhancerDB
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  3. rs112288574[chr17:27967102]
Enhancers that have rs112288574[chr17:27967102]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 27963570 27975125 enh4328
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs112288574[chr17:27967102]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 27967085 27967105 RREB1 JASPAR yes 53744375
chr17 27967085 27967106 IRF1 JASPAR yes 53744376
chr17 27967090 27967110 RREB1 JASPAR yes 53744378
chr17 27967090 27967111 IRF1 JASPAR yes 53744379
chr17 27967091 27967112 IRF1 JASPAR yes 53744380
chr17 27967092 27967107 FOXP1 JASPAR yes 53744381
chr17 27967096 27967117 IRF1 JASPAR yes 53744382
chr17 27967097 27967103 TCF4 TRANSFAC yes 53744383
chr17 27967097 27967112 FOXP1 JASPAR yes 53744384
chr17 27967098 27967109 FOXP2 JASPAR yes 53744385
chr17 27967098 27967110 FOXC2 JASPAR yes 53744386
chr17 27967098 27967113 STAT2 JASPAR yes 53744387
chr17 27967099 27967114 FOXP1 JASPAR yes 53744388
chr17 27967102 27967117 FOXP1 JASPAR yes 53744389
Genes associated with rs112288574[chr17:27967102], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More