EnhancerDB
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  3. rs112364156[chr12:52553151]
Enhancers that have rs112364156[chr12:52553151]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs112364156[chr12:52553151]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52552750 52553226 TCF7L2 GTRD no Colon (HCT116) 21546537
chr12 52553137 52553151 GLIS3 JASPAR yes 120923638
chr12 52553143 52553161 RARA JASPAR yes 120923639
chr12 52553145 52553158 DUXA JASPAR yes 120923640
chr12 52553145 52553158 JUN JASPAR yes 120923641
chr12 52553145 52553159 RORA JASPAR yes 120923642
chr12 52553146 52553157 DUX4 JASPAR yes 120923643
chr12 52553149 52553159 EVX1 JASPAR yes 120923644
chr12 52553149 52553159 EVX2 JASPAR yes 120923645
Genes associated with rs112364156[chr12:52553151], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More