EnhancerDB
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  3. rs112378791[chr17:62700598]
Enhancers that have rs112378791[chr17:62700598]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62688405 62713087 enh17300
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs112378791[chr17:62700598]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62699237 62712934 ZNF143 GTRD no Epithelial (MCF-7) 21779174
chr17 62699237 62712934 ZNF143 GTRD no Epithelial (MCF-7) 108282599
chr17 62699237 62712934 ZNF143 GTRD no Epithelial (MCF-7) 108282600
chr17 62700210 62700948 ZNF143 GTRD no Epithelial (MCF-7) 21779179
chr17 62700302 62707777 ZNF143 GTRD no Epithelial (MCF-7) 21779181
chr17 62700302 62707777 ZNF143 GTRD no Epithelial (MCF-7) 108282601
chr17 62700302 62707777 ZNF143 GTRD no Epithelial (MCF-7) 108282602
chr17 62700322 62700616 ZNF143 GTRD no Epithelial (MCF-7) 21779182
chr17 62700333 62700709 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21779183
chr17 62700531 62700821 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21779186
chr17 62700533 62700833 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21779187
chr17 62700583 62700602 PAX5 JASPAR yes 55314161
Genes associated with rs112378791[chr17:62700598], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More