EnhancerDB
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  3. rs11240404[chr1:205248957]
Enhancers that have rs11240404[chr1:205248957]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205243649 205259635 enh893
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Heart
Transcript factors that have rs11240404[chr1:205248957]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205246524 205250029 ZNF274 GTRD no Bone Marrow (K562) 21371215
chr1 205246593 205250269 ZNF274 GTRD no Cervix (HeLa-S3) 21371216
chr1 205247337 205250086 ZNF143 GTRD no Epithelial (MCF-7) 21371235
chr1 205247390 205249048 ZNF274 GTRD no Cervix (HeLa-S3) 21371236
chr1 205247742 205250034 ZNF143 GTRD no Epithelial (MCF-7) 21371240
chr1 205248462 205251020 ZNF143 GTRD no Epithelial (MCF-7) 21371243
chr1 205248482 205249842 ZNF274 GTRD no Bone Marrow (K562) 21371244
chr1 205248606 205249721 ZNF274 GTRD no Bone Marrow (K562) 21371245
chr1 205248639 205249513 ZNF274 GTRD no Bone Marrow (K562) 21371246
chr1 205248643 205249907 ZNF143 GTRD no Epithelial (MCF-7) 21371247
chr1 205248661 205249624 ZNF274 GTRD no Bone Marrow (K562) 21371248
chr1 205248675 205250015 ZNF143 GTRD no Epithelial (MCF-7) 21371249
chr1 205248680 205249518 ZNF274 GTRD no Bone Marrow (K562) 21371250
chr1 205248756 205249464 ZNF274 GTRD no Bone Marrow (K562) 21371251
chr1 205248762 205250048 ZNF143 GTRD no Epithelial (MCF-7) 21371252
chr1 205248764 205249625 ZNF274 GTRD no Bone Marrow (K562) 21371253
chr1 205248768 205250080 ZNF143 GTRD no Epithelial (MCF-7) 21371254
chr1 205248779 205249380 ZNF274 GTRD no Bone Marrow (K562) 21371255
chr1 205248783 205249900 ZNF274 GTRD no Bone Marrow (K562) 21371256
chr1 205248784 205249635 ZNF274 GTRD no Bone Marrow (K562) 21371257
chr1 205248786 205249382 ZNF274 GTRD no Bone Marrow (K562) 21371258
chr1 205248793 205249561 ZNF274 GTRD no Bone Marrow (K562) 21371259
chr1 205248814 205249489 ZNF274 GTRD no Bone Marrow (K562) 21371260
chr1 205248815 205250063 ZNF274 GTRD no Cervix (HeLa-S3) 21371261
chr1 205248817 205249570 ZNF274 GTRD no Bone Marrow (K562) 21371262
chr1 205248838 205249486 ZNF274 GTRD no Bone Marrow (K562) 21371263
chr1 205248839 205249470 ZNF274 GTRD no Bone Marrow (K562) 21371264
chr1 205248844 205249882 ZNF143 GTRD no Epithelial (MCF-7) 21371265
chr1 205248847 205249512 ZNF274 GTRD no Bone Marrow (K562) 21371266
chr1 205248854 205249431 ZNF274 GTRD no Bone Marrow (K562) 21371267
chr1 205248874 205249296 ZNF274 GTRD no Bone Marrow (K562) 21371268
chr1 205248887 205249524 ZNF274 GTRD no Bone Marrow (K562) 21371269
chr1 205248889 205249547 ZNF274 GTRD no Bone Marrow (K562) 21371270
chr1 205248894 205249527 ZNF274 GTRD no Bone Marrow (K562) 21371271
chr1 205248900 205249437 ZNF274 GTRD no Bone Marrow (K562) 21371272
chr1 205248902 205249437 ZNF274 GTRD no Bone Marrow (K562) 21371273
chr1 205248906 205249356 ZNF274 GTRD no Bone Marrow (K562) 21371274
chr1 205248910 205249386 ZNF274 GTRD no Bone Marrow (K562) 21371275
chr1 205248911 205249762 ZNF274 GTRD no Cervix (HeLa-S3) 21371276
chr1 205248916 205249464 ZNF274 GTRD no Bone Marrow (K562) 21371277
chr1 205248920 205249636 ZNF274 GTRD no Cervix (HeLa-S3) 21371278
chr1 205248951 205248961 SP1 JASPAR yes 34750657
Genes associated with rs11240404[chr1:205248957], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 204586298 204654861 - LRRN2 ENSG00000170382.7 204654861 594096 Stomach 0.133921 1755