EnhancerDB
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  3. rs112479402[chr1:21638472]
Enhancers that have rs112479402[chr1:21638472]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21624465 21668955 enh110
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs112479402[chr1:21638472]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21638462 21638481 PAX5 JASPAR yes 27294395
chr1 21638469 21638478 HIC2 JASPAR yes 27294396
chr1 21638470 21638490 TP53 JASPAR yes 27294397
chr1 21638472 21638476 LFA1 TRANSFAC yes 27294398
chr1 21638472 21638492 TP63 JASPAR yes 27294399
Genes associated with rs112479402[chr1:21638472], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More