EnhancerDB
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  3. rs112500298[chr16:87819780]
Enhancers that have rs112500298[chr16:87819780]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87806255 87830395 enh4179
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs112500298[chr16:87819780]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87819271 87820363 TCF7L2 GTRD no Colon (HCT116) 21734478
chr16 87819299 87820474 ZNF143 GTRD no Epithelial (MCF-7) 21734479
chr16 87819316 87820447 TCF7L2 GTRD no Colon (HCT116) 21734480
chr16 87819368 87820352 TCF7L2 GTRD no Colon (HCT116) 21734481
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220354
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220355
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220356
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220357
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220358
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220359
chr16 87819648 87864046 ZBTB33 GTRD no Lung (A549) 108220360
chr16 87819766 87819787 REST JASPAR yes 12239247
chr16 87819780 87819791 FOSL2 JASPAR yes 12239248
Genes associated with rs112500298[chr16:87819780], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More