EnhancerDB
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  3. rs112517007[chr19:2577842]
Enhancers that have rs112517007[chr19:2577842]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2555465 2582297 enh17850
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs112517007[chr19:2577842]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2576513 2580163 ZNF274 GTRD no Cervix (HeLa-S3) 21837210
chr19 2576513 2580163 ZNF274 GTRD no Cervix (HeLa-S3) 108362532
chr19 2576725 2579926 ZNF274 GTRD no Cervix (HeLa-S3) 21837211
chr19 2576725 2579926 ZNF274 GTRD no Cervix (HeLa-S3) 108362533
chr19 2577820 2580234 TCF7L2 GTRD no Colon (HCT116) 108362534
chr19 2577824 2577842 IRF2 JASPAR yes 112077595
chr19 2577826 2579974 ZNF274 GTRD no Cervix (HeLa-S3) 21837212
chr19 2577826 2579974 ZNF274 GTRD no Cervix (HeLa-S3) 108362535
chr19 2577826 2580119 ZNF274 GTRD no Blood (GM12878) 21837213
chr19 2577826 2580119 ZNF274 GTRD no Blood (GM12878) 108362536
chr19 2577830 2577851 IRF1 JASPAR yes 112077597
chr19 2577831 2577852 IRF1 JASPAR yes 112077598
chr19 2577833 2577848 PRDM1 JASPAR yes 112077599
chr19 2577833 2577848 STAT2 JASPAR yes 112077600
chr19 2577834 2577848 STAT1 JASPAR yes 112077602
chr19 2577836 2577857 IRF1 JASPAR yes 112077603
chr19 2577837 2577858 IRF1 JASPAR yes 112077604
chr19 2577838 2577843 ETS2 TRANSFAC yes 112077605
chr19 2577840 2577855 FOXP1 JASPAR yes 112077606
chr19 2577841 2577856 FOXP1 JASPAR yes 112077607
chr19 2577842 2577857 FOXP1 JASPAR yes 112077608
Genes associated with rs112517007[chr19:2577842], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More