EnhancerDB
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  3. rs112601679[chr1:28744829]
Enhancers that have rs112601679[chr1:28744829]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28732865 28757735 enh186
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs112601679[chr1:28744829]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28744814 28744829 MEF2C JASPAR yes 27768691
chr1 28744815 28744830 FOXP1 JASPAR yes 27768692
chr1 28744815 28744836 IRF1 JASPAR yes 27768693
chr1 28744816 28744831 FOXP1 JASPAR yes 27768694
chr1 28744817 28744832 FOXP1 JASPAR yes 27768695
chr1 28744823 28744835 FOXC2 JASPAR yes 27768696
Genes associated with rs112601679[chr1:28744829], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More