EnhancerDB
  1. Home
  2. SNP
  3. rs112636836[chr1:27927159]
Enhancers that have rs112636836[chr1:27927159]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
chr1 27926949 27927449 vista936
VISTA
Transcript factors that have rs112636836[chr1:27927159]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27927148 27927161 TFAP2A JASPAR yes 27714867
chr1 27927148 27927161 TFAP2B JASPAR yes 27714868
chr1 27927148 27927161 TFAP2C JASPAR yes 27714869
chr1 27927148 27927161 TFAP2A JASPAR yes 118259052
chr1 27927148 27927161 TFAP2B JASPAR yes 118259053
chr1 27927148 27927161 TFAP2C JASPAR yes 118259054
chr1 27927153 27927167 TLX1 JASPAR yes 27714870
chr1 27927153 27927167 TLX1 JASPAR yes 118259055
Genes associated with rs112636836[chr1:27927159], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More