EnhancerDB
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  3. rs112652271[chr12:124996165]
Enhancers that have rs112652271[chr12:124996165]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 124961018 125019902 enh2673
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs112652271[chr12:124996165]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 124996152 124996171 CTCF JASPAR yes 124386891
chr12 124996153 124996168 ZIC4 JASPAR yes 124386892
chr12 124996154 124996168 ZIC1 JASPAR yes 124386893
chr12 124996159 124996170 E2F1 JASPAR yes 124386894
chr12 124996160 124996165 SP1 TRANSFAC yes 124386895
chr12 124996164 124996173 SNAI2 JASPAR yes 124386896
chr12 124996164 124996174 TCF4 JASPAR yes 124386897
Genes associated with rs112652271[chr12:124996165], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More