EnhancerDB
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  3. rs112685875[chr1:209594498]
Enhancers that have rs112685875[chr1:209594498]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209568193 209597635 enh12617
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Uterus Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs112685875[chr1:209594498]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209593856 209594909 ZNF143 GTRD no Epithelial (MCF-7) 21375398
chr1 209594168 209594760 ZNF143 GTRD no Epithelial (MCF-7) 21375403
chr1 209594215 209594821 ZNF143 GTRD no Epithelial (MCF-7) 21375404
chr1 209594240 209594786 ZNF143 GTRD no Epithelial (MCF-7) 21375405
chr1 209594434 209594780 ZNF143 GTRD no Epithelial (MCF-7) 21375406
chr1 209594488 209594737 ZNF143 GTRD no Epithelial (MCF-7) 21375407
chr1 209594490 209594792 ZBTB33 GTRD no Lung (A549) 21375408
Genes associated with rs112685875[chr1:209594498], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More