EnhancerDB
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  3. rs112739227[chr16:87885972]
Enhancers that have rs112739227[chr16:87885972]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87873744 87902035 enh4182
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs112739227[chr16:87885972]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221259
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221260
chr16 87883470 87890813 POLR2A UCSC Txn Factor no Conserved 108221261
chr16 87884859 87886321 TCF7L2 GTRD no Colon (HCT116) 21735196
chr16 87884859 87886321 TCF7L2 GTRD no Colon (HCT116) 108221262
chr16 87885162 87886259 ZNF274 GTRD no Liver (HepG2) 21735197
chr16 87885162 87886259 ZNF274 GTRD no Liver (HepG2) 108221263
chr16 87885277 87886914 ZNF274 GTRD no Liver (HepG2) 21735198
chr16 87885277 87886914 ZNF274 GTRD no Liver (HepG2) 108221264
chr16 87885962 87885979 BCL6B JASPAR yes 12247183
chr16 87885963 87885978 STAT1 JASPAR yes 12247184
chr16 87885965 87885976 STAT1 JASPAR yes 12247185
chr16 87885965 87885976 STAT3 JASPAR yes 12247186
chr16 87885966 87885978 EHF JASPAR yes 12247187
chr16 87885966 87885978 ELF4 JASPAR yes 12247188
chr16 87885967 87885978 SPDEF JASPAR yes 12247189
Genes associated with rs112739227[chr16:87885972], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More