EnhancerDB
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  3. rs112770231[chr1:180498853]
Enhancers that have rs112770231[chr1:180498853]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180482964 180504974 enh12423
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs112770231[chr1:180498853]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180498437 180499020 TEF1 GTRD no Bone (Osteoblast) 21353378
chr1 180498492 180499040 ZNF274 GTRD no Liver (HepG2) 21353379
chr1 180498513 180499094 ZNF274 GTRD no Cervix (HeLa-S3) 21353380
chr1 180498549 180499012 ZNF274 GTRD no Liver (HepG2) 21353381
chr1 180498558 180499009 ZNF274 GTRD no Bone Marrow (K562) 21353382
chr1 180498589 180498958 TEF1 GTRD no Bone (Osteoblast) 21353383
chr1 180498602 180498963 ZNF274 GTRD no Liver (HepG2) 21353384
chr1 180498840 180498855 MAFK JASPAR yes 33521742
chr1 180498847 180498856 VENTX JASPAR yes 33521743
chr1 180498847 180498857 GBX2 JASPAR yes 33521744
chr1 180498847 180498857 HOXB3 JASPAR yes 33521745
chr1 180498847 180498857 MNX1 JASPAR yes 33521746
chr1 180498848 180498856 BARX1 JASPAR yes 33521747
chr1 180498848 180498856 EN1 JASPAR yes 33521748
chr1 180498848 180498856 ISL2 JASPAR yes 33521749
chr1 180498848 180498856 MSX1 JASPAR yes 33521750
chr1 180498848 180498856 MSX2 JASPAR yes 33521751
chr1 180498848 180498856 PDX1 JASPAR yes 33521752
Genes associated with rs112770231[chr1:180498853], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More