EnhancerDB
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  3. rs11280827[chr4:88040185]
Enhancers that have rs11280827[chr4:88040185]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 88036285 88045724 enh36790
Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Thyroid Uterus Kidney Neural Stem Cells (H9) Heart
Transcript factors that have rs11280827[chr4:88040185]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 88040169 88040187 IRF2 JASPAR yes 91106300
chr4 88040170 88040191 IRF1 JASPAR yes 91106301
chr4 88040172 88040187 PRDM1 JASPAR yes 91106302
chr4 88040172 88040187 STAT2 JASPAR yes 91106303
chr4 88040173 88040187 STAT1 JASPAR yes 91106304
chr4 88040174 88040186 IRF1 JASPAR yes 91106305
chr4 88040174 88040188 IRF7 JASPAR yes 91106306
chr4 88040174 88040188 IRF8 JASPAR yes 91106307
chr4 88040174 88040189 IRF9 JASPAR yes 91106308
chr4 88040180 88040190 NFATC3 JASPAR yes 91106310
chr4 88040181 88040188 NFATC2 JASPAR yes 91106311
Genes associated with rs11280827[chr4:88040185], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More