EnhancerDB
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  3. rs112838390[chr1:178019274]
Enhancers that have rs112838390[chr1:178019274]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178015665 178033840 enh12406
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Lung (PC-9) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs112838390[chr1:178019274]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178019249 178019529 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21352332
chr1 178019257 178019547 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21352333
chr1 178019261 178019597 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21352334
chr1 178019268 178019277 SOX9 JASPAR yes 33389377
Genes associated with rs112838390[chr1:178019274], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More