EnhancerDB
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  3. rs112852954[chr17:57070535]
Enhancers that have rs112852954[chr17:57070535]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57067145 57084553 enh4500
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Liver Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs112852954[chr17:57070535]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57070534 57070549 PRDM1 JASPAR yes 55037689
Genes associated with rs112852954[chr17:57070535], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 57751997 57784987 - PTRH2 ENSG00000141378.13 57784987 681462 Stomach 0.316224 16105