EnhancerDB
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  3. rs112858830[chr19:13289254]
Enhancers that have rs112858830[chr19:13289254]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13265805 13289518 enh17931
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs112858830[chr19:13289254]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13289233 13289254 IRF1 JASPAR yes 112516678
chr19 13289237 13289258 IRF1 JASPAR yes 112516681
chr19 13289238 13289259 IRF1 JASPAR yes 112516683
chr19 13289242 13289263 IRF1 JASPAR yes 112516684
chr19 13289243 13289264 IRF1 JASPAR yes 112516685
chr19 13289248 13289268 RREB1 JASPAR yes 112516686
chr19 13289248 13289269 IRF1 JASPAR yes 112516687
chr19 13289249 13289255 TCF4 TRANSFAC yes 112516688
chr19 13289249 13289264 FOXP1 JASPAR yes 112516689
chr19 13289250 13289261 FOXP2 JASPAR yes 112516690
chr19 13289250 13289262 FOXC2 JASPAR yes 112516691
chr19 13289251 13289266 FOXP1 JASPAR yes 112516692
Genes associated with rs112858830[chr19:13289254], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More