EnhancerDB
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  3. rs11289406[chr1:95258666]
Enhancers that have rs11289406[chr1:95258666]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 95254882 95276775 enh12082
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs11289406[chr1:95258666]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 95258418 95258748 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107816014
chr1 95258660 95258675 FOXP1 JASPAR yes 30916798
chr1 95258660 95258681 IRF1 JASPAR yes 30916799
chr1 95258661 95258676 FOXP1 JASPAR yes 30916800
chr1 95258662 95258667 ETS2 TRANSFAC yes 30916801
chr1 95258664 95258679 STAT2 JASPAR yes 30916802
chr1 95258664 95258685 IRF1 JASPAR yes 30916803
Genes associated with rs11289406[chr1:95258666], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More