EnhancerDB
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  3. rs112908623[chr17:46564100]
Enhancers that have rs112908623[chr17:46564100]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46553725 46585590 enh4456
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs112908623[chr17:46564100]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46563872 46564312 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21767693
chr17 46563899 46564283 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21767694
chr17 46563916 46564196 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21767695
chr17 46563941 46564251 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21767696
chr17 46563949 46564233 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21767697
chr17 46563966 46564236 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21767698
chr17 46564006 46564296 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21767699
chr17 46564021 46564265 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21767700
chr17 46564033 46564223 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21767701
chr17 46564049 46564137 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21767702
chr17 46564091 46564267 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21767703
chr17 46564093 46564110 RARA JASPAR yes 54588781
Genes associated with rs112908623[chr17:46564100], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More