EnhancerDB
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  3. rs112940020[chr5:149836953]
Enhancers that have rs112940020[chr5:149836953]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 149834702 149859546 enh8799
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs112940020[chr5:149836953]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 149836947 149836956 PITX3 JASPAR yes 66880197
chr5 149836947 149836957 GSC2 JASPAR yes 66880198
chr5 149836947 149836957 GSC JASPAR yes 66880199
chr5 149836948 149836956 OTX1 JASPAR yes 66880200
chr5 149836948 149836956 OTX2 JASPAR yes 66880201
chr5 149836948 149836956 RHOXF1 JASPAR yes 66880202
Genes associated with rs112940020[chr5:149836953], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More