EnhancerDB
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  3. rs11296197[chr1:201420635]
Enhancers that have rs11296197[chr1:201420635]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201414985 201433510 enh875
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs11296197[chr1:201420635]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201420508 201421496 ZNF143 GTRD no Epithelial (MCF-7) 21364041
chr1 201420533 201421477 ZNF143 GTRD no Epithelial (MCF-7) 21364042
chr1 201420622 201421378 TCF7L2 GTRD no Colon (HCT116) 21364043
chr1 201420625 201420646 IRF1 JASPAR yes 34494911
chr1 201420626 201420647 IRF1 JASPAR yes 34494912
chr1 201420629 201420650 IRF1 JASPAR yes 34494914
chr1 201420630 201420645 FOXP1 JASPAR yes 34494915
chr1 201420630 201420651 IRF1 JASPAR yes 34494916
chr1 201420631 201420652 IRF1 JASPAR yes 34494917
chr1 201420632 201420647 FOXP1 JASPAR yes 34494918
chr1 201420634 201420649 FOXP1 JASPAR yes 34494919
chr1 201420635 201420650 FOXP1 JASPAR yes 34494920
Genes associated with rs11296197[chr1:201420635], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More