EnhancerDB
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  3. rs112988801[chr1:225943817]
Enhancers that have rs112988801[chr1:225943817]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225938095 225960315 enh12725
Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs112988801[chr1:225943817]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225941037 225946019 STAT3 GTRD no Blood (OCI-LY7) 21385734
chr1 225943314 225943903 SOX2 GTRD no Neural Stem Cells (H9) 21385778
chr1 225943480 225943851 SOX2 GTRD no Neural Stem Cells (H9) 21385780
chr1 225943484 225943858 SOX2 GTRD no Neural Stem Cells (H9) 21385781
chr1 225943808 225943824 POU4F3 JASPAR yes 35767839
chr1 225943810 225943824 POU4F1 JASPAR yes 35767840
chr1 225943810 225943825 HNF1A JASPAR yes 35767841
chr1 225943811 225943824 HNF1B JASPAR yes 35767842
chr1 225943811 225943825 POU4F1 JASPAR yes 35767843
chr1 225943811 225943827 POU4F2 JASPAR yes 35767844
chr1 225943811 225943827 POU4F3 JASPAR yes 35767845
chr1 225943812 225943828 POU4F2 JASPAR yes 35767846
chr1 225943812 225943828 POU4F3 JASPAR yes 35767847
chr1 225943813 225943828 MEF2A JASPAR yes 35767848
chr1 225943814 225943828 POU4F1 JASPAR yes 35767849
chr1 225943815 225943827 MEF2A JASPAR yes 35767850
chr1 225943815 225943827 MEF2B JASPAR yes 35767851
chr1 225943815 225943827 MEF2D JASPAR yes 35767852
chr1 225943816 225943826 MEF2A JASPAR yes 35767853
chr1 225943817 225943821 YY1 TRANSFAC yes 35767854
Genes associated with rs112988801[chr1:225943817], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More