EnhancerDB
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  3. rs113002429[chr1:19329152]
Enhancers that have rs113002429[chr1:19329152]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19322701 19342495 enh11568
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs113002429[chr1:19329152]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19329134 19329154 RREB1 JASPAR yes 27169543
chr1 19329138 19329158 RREB1 JASPAR yes 27169547
chr1 19329141 19329161 RREB1 JASPAR yes 27169548
chr1 19329142 19329162 RREB1 JASPAR yes 27169549
chr1 19329143 19329164 IRF1 JASPAR yes 27169550
chr1 19329144 19329159 FOXP1 JASPAR yes 27169551
chr1 19329146 19329161 FOXP1 JASPAR yes 27169552
chr1 19329147 19329162 STAT2 JASPAR yes 27169553
chr1 19329148 19329163 FOXP1 JASPAR yes 27169554
chr1 19329148 19329169 IRF1 JASPAR yes 27169555
chr1 19329149 19329170 IRF1 JASPAR yes 27169556
chr1 19329150 19329162 FOXC2 JASPAR yes 27169557
chr1 19329151 19329162 FOXP2 JASPAR yes 27169558
Genes associated with rs113002429[chr1:19329152], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More