EnhancerDB
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  3. rs11301460[chr12:50953096]
Enhancers that have rs11301460[chr12:50953096]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs11301460[chr12:50953096]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50953088 50953109 IRF1 JASPAR yes 120843745
chr12 50953090 50953111 IRF1 JASPAR yes 120843746
chr12 50953091 50953106 FOXP1 JASPAR yes 120843747
chr12 50953091 50953112 IRF1 JASPAR yes 120843748
chr12 50953092 50953113 IRF1 JASPAR yes 120843749
chr12 50953093 50953108 FOXP1 JASPAR yes 120843750
chr12 50953093 50953114 IRF1 JASPAR yes 120843751
chr12 50953094 50953115 IRF1 JASPAR yes 120843752
chr12 50953095 50953110 FOXP1 JASPAR yes 120843753
chr12 50953096 50953111 FOXP1 JASPAR yes 120843754
Genes associated with rs11301460[chr12:50953096], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More