EnhancerDB
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  3. rs11303099[chr12:50912006]
Enhancers that have rs11303099[chr12:50912006]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs11303099[chr12:50912006]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50911670 50912070 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21545026
chr12 50911670 50912070 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108031193
chr12 50911723 50912104 ZNF274 GTRD no Bone Marrow (K562) 21545027
chr12 50911723 50912104 ZNF274 GTRD no Bone Marrow (K562) 108031194
chr12 50911956 50912254 ZNF143 GTRD no Epithelial (MCF-7) 21545028
chr12 50911956 50912254 ZNF143 GTRD no Epithelial (MCF-7) 108031195
chr12 50912000 50912021 IRF1 JASPAR yes 120836998
chr12 50912002 50912017 PRDM1 JASPAR yes 120836999
chr12 50912002 50912017 STAT2 JASPAR yes 120837000
chr12 50912003 50912024 IRF1 JASPAR yes 120837001
chr12 50912004 50912025 IRF1 JASPAR yes 120837002
chr12 50912005 50912020 FOXP1 JASPAR yes 120837003
chr12 50912006 50912021 FOXP1 JASPAR yes 120837004
Genes associated with rs11303099[chr12:50912006], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More