EnhancerDB
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  3. rs113040328[chr1:229231537]
Enhancers that have rs113040328[chr1:229231537]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229225622 229286295 enh12760
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Ovary Esophagus Liver Blood (T-cell) Blood (OCI-LY7) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs113040328[chr1:229231537]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229228678 229232083 AR GTRD no Prostate (PC-3) 21389897
chr1 229228678 229232083 AR GTRD no Prostate (PC-3) 107877686
chr1 229228744 229232100 ZNF274 GTRD no Cervix (HeLa-S3) 21389898
chr1 229228744 229232100 ZNF274 GTRD no Cervix (HeLa-S3) 107877687
chr1 229228818 229232486 ZNF274 GTRD no Cervix (HeLa-S3) 21389900
chr1 229228818 229232486 ZNF274 GTRD no Cervix (HeLa-S3) 107877689
chr1 229228830 229232022 ZBTB33 GTRD no Lung (A549) 107877691
chr1 229228877 229232149 ZBTB33 GTRD no Lung (A549) 107877698
chr1 229228881 229232191 ZBTB33 GTRD no Lung (A549) 107877700
chr1 229228899 229232080 ZNF274 GTRD no Cervix (HeLa-S3) 21389909
chr1 229228899 229232080 ZNF274 GTRD no Cervix (HeLa-S3) 107877703
chr1 229228986 229232108 ZNF274 GTRD no Cervix (HeLa-S3) 21389915
chr1 229228986 229232108 ZNF274 GTRD no Cervix (HeLa-S3) 107877710
chr1 229230243 229231728 ZNF143 GTRD no Epithelial (MCF-7) 21389946
chr1 229230279 229231743 ZNF143 GTRD no Epithelial (MCF-7) 21389950
chr1 229230300 229231826 ZNF143 GTRD no Epithelial (MCF-7) 21389951
chr1 229230315 229231963 ZNF143 GTRD no Epithelial (MCF-7) 21389954
chr1 229230336 229231805 ZNF143 GTRD no Epithelial (MCF-7) 21389955
chr1 229230348 229231906 ZNF274 GTRD no Cervix (HeLa-S3) 21389956
chr1 229230355 229231922 ZNF143 GTRD no Epithelial (MCF-7) 21389957
chr1 229230412 229232073 ZNF274 GTRD no Cervix (HeLa-S3) 21389958
chr1 229230494 229231580 ZNF274 GTRD no Cervix (HeLa-S3) 21389966
chr1 229231034 229231729 ZNF143 GTRD no Epithelial (MCF-7) 21389995
chr1 229231034 229231814 ZNF274 GTRD no Cervix (HeLa-S3) 21389996
chr1 229231054 229231733 ZNF143 GTRD no Epithelial (MCF-7) 21389997
chr1 229231172 229231588 ZNF143 GTRD no Epithelial (MCF-7) 21389998
chr1 229231181 229231983 ZNF274 GTRD no Cervix (HeLa-S3) 21389999
chr1 229231184 229231955 ZNF274 GTRD no Cervix (HeLa-S3) 21390000
chr1 229231254 229232047 ZNF274 GTRD no Cervix (HeLa-S3) 21390001
chr1 229231287 229231896 ZNF274 GTRD no Cervix (HeLa-S3) 21390002
chr1 229231311 229231756 ZNF274 GTRD no Cervix (HeLa-S3) 21390003
chr1 229231356 229232339 ZNF143 GTRD no Epithelial (MCF-7) 21390004
chr1 229231357 229232445 ZNF274 GTRD no Cervix (HeLa-S3) 21390005
chr1 229231416 229232324 ZNF143 GTRD no Epithelial (MCF-7) 21390006
chr1 229231426 229231717 SOX2 GTRD no Neural Stem Cells (H9) 21390007
chr1 229231428 229231733 SOX2 GTRD no Neural Stem Cells (H9) 21390008
chr1 229231444 229231724 SOX2 GTRD no Neural Stem Cells (H9) 21390009
chr1 229231460 229231704 SOX2 GTRD no Neural Stem Cells (H9) 21390010
Genes associated with rs113040328[chr1:229231537], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More