EnhancerDB
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  3. rs11309444[chr12:58224886]
Enhancers that have rs11309444[chr12:58224886]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 58223192 58238686 enh14761
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Kidney Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Large Intestine Blood (GM12878) Placenta Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs11309444[chr12:58224886]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 58224879 58224894 FOXP1 JASPAR yes 121140576
chr12 58224880 58224894 GATA2 JASPAR yes 121140577
chr12 58224881 58224896 FOXP1 JASPAR yes 121140578
chr12 58224882 58224890 GATA3 JASPAR yes 121140579
chr12 58224882 58224903 IRF1 JASPAR yes 121140580
chr12 58224883 58224898 FOXP1 JASPAR yes 121140581
chr12 58224883 58224904 IRF1 JASPAR yes 121140582
chr12 58224884 58224899 FOXP1 JASPAR yes 121140583
chr12 58224884 58224905 IRF1 JASPAR yes 121140584
chr12 58224885 58224891 TBP TRANSFAC yes 121140585
chr12 58224885 58224900 FOXP1 JASPAR yes 121140586
chr12 58224885 58224906 IRF1 JASPAR yes 121140587
chr12 58224886 58224901 FOXP1 JASPAR yes 121140588
chr12 58224886 58224907 IRF1 JASPAR yes 121140589
Genes associated with rs11309444[chr12:58224886], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More