EnhancerDB
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  3. rs113172233[chr1:25044020]
Enhancers that have rs113172233[chr1:25044020]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs113172233[chr1:25044020]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25044009 25044020 USF1 JASPAR yes 27522441
chr1 25044009 25044020 USF2 JASPAR yes 27522442
chr1 25044015 25044020 ATF1 TRANSFAC yes 27522443
Genes associated with rs113172233[chr1:25044020], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More