EnhancerDB
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  3. rs113184617[chr1:25052580]
Enhancers that have rs113184617[chr1:25052580]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs113184617[chr1:25052580]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25052566 25052581 TFAP2A JASPAR yes 27523610
chr1 25052567 25052581 NR2F1 JASPAR yes 27523611
chr1 25052568 25052583 TFAP2C JASPAR yes 27523612
chr1 25052572 25052585 NR2F1 JASPAR yes 27523613
chr1 25052573 25052581 CREB1 JASPAR yes 27523614
chr1 25052574 25052592 RARA JASPAR yes 27523615
chr1 25052576 25052580 ESR1 TRANSFAC yes 27523616
Genes associated with rs113184617[chr1:25052580], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More