EnhancerDB
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  3. rs113272956[chr19:2535497]
Enhancers that have rs113272956[chr19:2535497]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs113272956[chr19:2535497]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2535494 2535509 FOXP1 JASPAR yes 112070891
chr19 2535495 2535510 FOXP1 JASPAR yes 112070892
chr19 2535496 2535511 FOXP1 JASPAR yes 112070893
chr19 2535497 2535512 FOXP1 JASPAR yes 112070894
chr19 2535497 2535518 IRF1 JASPAR yes 112070895
Genes associated with rs113272956[chr19:2535497], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More