EnhancerDB
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  3. rs11329389[chr12:52548494]
Enhancers that have rs11329389[chr12:52548494]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs11329389[chr12:52548494]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52547500 52548954 ZNF143 GTRD no Epithelial (MCF-7) 21546515
chr12 52548488 52548509 IRF1 JASPAR yes 120922908
chr12 52548489 52548510 IRF1 JASPAR yes 120922909
chr12 52548493 52548508 FOXP1 JASPAR yes 120922910
chr12 52548493 52548514 IRF1 JASPAR yes 120922911
chr12 52548494 52548509 FOXP1 JASPAR yes 120922912
Genes associated with rs11329389[chr12:52548494], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More