EnhancerDB
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  3. rs113299872[chr17:49033442]
Enhancers that have rs113299872[chr17:49033442]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49015225 49039275 enh17224
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs113299872[chr17:49033442]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49031413 49033500 ZBTB33 GTRD no Lung (A549) 108272040
chr17 49031753 49033475 ZBTB33 GTRD no Lung (A549) 108272056
chr17 49032632 49033511 TCF7L2 GTRD no Colon (HCT116) 21771849
chr17 49032633 49033494 ZNF143 GTRD no Epithelial (MCF-7) 21771850
Genes associated with rs113299872[chr17:49033442], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 48133332 48167845 + ITGA3 ENSG00000005884.13 48133332 865597 Liver 0.31748 16024