EnhancerDB
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Enhancers that have rs11338554[chr1:151940738]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 151932405 151955339 enh12260
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Thyroid Lung (PC-9) Kidney Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs11338554[chr1:151940738]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 151940463 151940839 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21338736
chr1 151940464 151940784 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21338737
chr1 151940479 151940809 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21338738
chr1 151940484 151940754 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21338739
chr1 151940491 151940795 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21338740
chr1 151940532 151940767 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21338741
chr1 151940557 151940752 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21338743
chr1 151940590 151940745 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21338745
chr1 151940720 151940739 REST JASPAR yes 32207890
chr1 151940731 151940744 NFKB1 JASPAR yes 32207891
chr1 151940731 151940744 NFKB2 JASPAR yes 32207892
chr1 151940732 151940743 NFKB1 JASPAR yes 32207893
chr1 151940736 151940756 RREB1 JASPAR yes 32207895
chr1 151940737 151940747 ZNF740 JASPAR yes 32207896
Genes associated with rs11338554[chr1:151940738], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More