EnhancerDB
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  3. rs11340898[chr12:53250286]
Enhancers that have rs11340898[chr12:53250286]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53249369 53285465 enh14733
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs11340898[chr12:53250286]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53249545 53250865 ZNF143 GTRD no Epithelial (MCF-7) 21547313
chr12 53249564 53250563 ZNF143 GTRD no Epithelial (MCF-7) 21547314
chr12 53249656 53250528 ZNF143 GTRD no Epithelial (MCF-7) 21547315
chr12 53249659 53250479 ZNF274 GTRD no Liver (HepG2) 21547316
chr12 53249705 53250489 ZNF274 GTRD no Liver (HepG2) 21547317
chr12 53249817 53250346 ZNF274 GTRD no Liver (HepG2) 21547319
chr12 53249825 53250341 ZNF143 GTRD no Epithelial (MCF-7) 21547320
chr12 53249963 53250345 ZBTB33 GTRD no Lung (A549) 21547323
chr12 53249983 53250432 ZNF274 GTRD no Liver (HepG2) 21547325
chr12 53250285 53250288 MYB TRANSFAC yes 120955015
Genes associated with rs11340898[chr12:53250286], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More