EnhancerDB
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  3. rs11349988[chr11:65902037]
Enhancers that have rs11349988[chr11:65902037]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 65889425 65921015 enh1832
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs11349988[chr11:65902037]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 65895205 65903996 ZNF274 GTRD no Bone Marrow (K562) 21496344
chr11 65895205 65903996 ZNF274 GTRD no Bone Marrow (K562) 107982361
chr11 65898157 65904465 ZBTB33 GTRD no Lung (A549) 107982362
chr11 65901742 65904418 TCF7L2 GTRD no Colon (HCT116) 21496345
chr11 65901742 65904418 TCF7L2 GTRD no Colon (HCT116) 107982363
chr11 65902020 65902040 RREB1 JASPAR yes 39354587
chr11 65902023 65902038 LEF1 JASPAR yes 39354588
chr11 65902024 65902038 TCF7L2 JASPAR yes 39354589
chr11 65902035 65902039 YY1 TRANSFAC yes 39354590
chr11 65902037 65902052 FOXP1 JASPAR yes 39354591
chr11 65902037 65902058 IRF1 JASPAR yes 39354592
Genes associated with rs11349988[chr11:65902037], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr11 66045661 66052772 + CNIH2 ENSG00000174871.6 66045661 143624 Esophagus 0.227982 11107