EnhancerDB
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  3. rs11352398[chr17:39063783]
Enhancers that have rs11352398[chr17:39063783]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39055145 39077753 enh17145
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs11352398[chr17:39063783]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39062993 39063884 P63 GTRD no Skin (Keratinocyte) 21757176
chr17 39063762 39063783 IRF1 JASPAR yes 54242921
chr17 39063767 39063788 IRF1 JASPAR yes 54242924
chr17 39063768 39063783 FOXP1 JASPAR yes 54242925
chr17 39063768 39063789 IRF1 JASPAR yes 54242926
chr17 39063769 39063784 STAT2 JASPAR yes 54242927
chr17 39063772 39063793 IRF1 JASPAR yes 54242928
chr17 39063773 39063788 FOXP1 JASPAR yes 54242929
chr17 39063773 39063794 IRF1 JASPAR yes 54242930
chr17 39063777 39063798 IRF1 JASPAR yes 54242931
chr17 39063778 39063793 FOXP1 JASPAR yes 54242932
chr17 39063778 39063799 IRF1 JASPAR yes 54242933
chr17 39063779 39063800 IRF1 JASPAR yes 54242934
chr17 39063780 39063795 FOXP1 JASPAR yes 54242935
chr17 39063780 39063801 IRF1 JASPAR yes 54242936
chr17 39063782 39063797 FOXP1 JASPAR yes 54242937
chr17 39063783 39063798 FOXP1 JASPAR yes 54242938
Genes associated with rs11352398[chr17:39063783], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More