EnhancerDB
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  3. rs113595475[chr16:29268604]
Enhancers that have rs113595475[chr16:29268604]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29265834 29287135 enh31760
Astrocyte Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs113595475[chr16:29268604]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29268013 29268754 ZNF143 GTRD no Epithelial (MCF-7) 21701937
chr16 29268061 29268925 ZNF274 GTRD no Cervix (HeLa-S3) 21701939
chr16 29268201 29268627 ZNF143 GTRD no Epithelial (MCF-7) 21701941
chr16 29268314 29268759 ZNF143 GTRD no Epithelial (MCF-7) 21701942
chr16 29268321 29268769 ZNF143 GTRD no Epithelial (MCF-7) 21701943
chr16 29268324 29268843 ZNF274 GTRD no Liver (HepG2) 21701944
chr16 29268326 29268818 ZNF143 GTRD no Epithelial (MCF-7) 21701945
chr16 29268367 29268793 ZNF274 GTRD no Liver (HepG2) 21701946
chr16 29268374 29268711 ZNF274 GTRD no Cervix (HeLa-S3) 21701947
chr16 29268379 29268948 ZNF274 GTRD no Liver (HepG2) 21701948
chr16 29268446 29270076 ZNF274 GTRD no Cervix (HeLa-S3) 21701949
chr16 29268451 29268761 ZNF274 GTRD no Cervix (HeLa-S3) 21701950
chr16 29268469 29268682 ZNF274 GTRD no Liver (HepG2) 21701951
chr16 29268525 29269892 ZBTB33 GTRD no Brain (SK-N-SH) 21701952
chr16 29268545 29269285 ZNF274 GTRD no Liver (HepG2) 21701953
chr16 29268590 29268605 HNF4A JASPAR yes 10254536
chr16 29268598 29268616 IRF2 JASPAR yes 10254537
chr16 29268602 29268616 STAT1 JASPAR yes 10254538
Genes associated with rs113595475[chr16:29268604], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 29882480 29910868 - SEZ6L2 ENSG00000174938.10 29910868 613876 Liver 0.308303 14717