EnhancerDB
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  3. rs113598925[chr2:26225172]
Enhancers that have rs113598925[chr2:26225172]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26217845 26245475 enh18363
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr2 26225024 26225227 vista30740
VISTA
Transcript factors that have rs113598925[chr2:26225172]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26225161 26225172 USF1 JASPAR yes 22020493
chr2 26225161 26225172 USF2 JASPAR yes 22020494
chr2 26225161 26225172 USF1 JASPAR yes 72515098
chr2 26225161 26225172 USF2 JASPAR yes 72515099
chr2 26225162 26225172 TFE3 JASPAR yes 22020495
chr2 26225162 26225172 TFEB JASPAR yes 22020496
chr2 26225162 26225172 TFEC JASPAR yes 22020497
chr2 26225162 26225172 TFE3 JASPAR yes 72515100
chr2 26225162 26225172 TFEB JASPAR yes 72515101
chr2 26225162 26225172 TFEC JASPAR yes 72515102
chr2 26225167 26225180 SMAD2 JASPAR yes 22020498
chr2 26225167 26225180 SMAD2 JASPAR yes 72515103
chr2 26225172 26225184 NHLH1 JASPAR yes 22020499
chr2 26225172 26225184 NHLH1 JASPAR yes 72515104
Genes associated with rs113598925[chr2:26225172], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More