EnhancerDB
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  3. rs11371080[chr6:13424091]
Enhancers that have rs11371080[chr6:13424091]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13417125 13443009 enh8962
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs11371080[chr6:13424091]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13424071 13424092 IRF1 JASPAR yes 100029056
chr6 13424075 13424096 IRF1 JASPAR yes 100029057
chr6 13424079 13424099 RREB1 JASPAR yes 100029058
chr6 13424081 13424096 FOXA1 JASPAR yes 100029059
chr6 13424082 13424094 FOXI1 JASPAR yes 100029061
chr6 13424082 13424097 FOXP1 JASPAR yes 100029062
chr6 13424083 13424095 FOXC2 JASPAR yes 100029063
chr6 13424083 13424103 RREB1 JASPAR yes 100029064
chr6 13424085 13424096 FOXA1 JASPAR yes 100029065
chr6 13424086 13424101 FOXP1 JASPAR yes 100029066
chr6 13424087 13424098 FOXP2 JASPAR yes 100029067
chr6 13424087 13424099 FOXC2 JASPAR yes 100029068
chr6 13424088 13424108 RREB1 JASPAR yes 100029069
Genes associated with rs11371080[chr6:13424091], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More