EnhancerDB
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  3. rs113716001[chr17:78765532]
Enhancers that have rs113716001[chr17:78765532]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs113716001[chr17:78765532]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78765523 78765534 CDX2 JASPAR yes 56280215
chr17 78765524 78765535 HOXA10 JASPAR yes 56280216
chr17 78765525 78765534 CDX1 JASPAR yes 56280217
chr17 78765525 78765535 HOXA13 JASPAR yes 56280218
chr17 78765525 78765535 HOXB13 JASPAR yes 56280219
chr17 78765525 78765535 HOXD13 JASPAR yes 56280220
Genes associated with rs113716001[chr17:78765532], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More