EnhancerDB
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  3. rs113744579[chr1:55428406]
Enhancers that have rs113744579[chr1:55428406]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55426360 55441461 enh371
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs113744579[chr1:55428406]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55426206 55431252 ZNF274 GTRD no Cervix (HeLa-S3) 21325384
chr1 55428391 55428406 SOX21 JASPAR yes 29011014
chr1 55428391 55428407 SOX4 JASPAR yes 29011015
chr1 55428394 55428409 IRF9 JASPAR yes 29011016
Genes associated with rs113744579[chr1:55428406], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More